TBLASTN 2.6.0+


Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.



Database: transcriptome.fasta
           170,863 sequences; 171,729,825 total letters



Query= Humano

Length=96
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Tri_24805|m.699945  Tri_24805|g.699945 ORF Tri_24805|g.699945 Tri...  49.7    1e-08


>Tri_24805|m.699945 Tri_24805|g.699945  ORF Tri_24805|g.699945 Tri_24805|m.699945 
type:complete len:102 (+) Tri_24805:22-327(+)
Length=306

 Score = 49.7 bits (117),  Expect = 1e-08, Method: Compositional matrix adjust.
 Identities = 30/70 (43%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
 Frame = +1

Query  28   QHWSYGLRPGGKRDA-ENLIDSFQEIVKEVGQLAETQRFECTTHQPRSPLRDLKGALESL  86
            QHWSYGLRPGGKR+A E+L D  Q+I +++  L   +   C    P      L+  L  L
Sbjct  82   QHWSYGLRPGGKRNAHESLQDVLQDITEDMELLHAPREPACV--HPCVRKSSLREILNIL  255

Query  87   IEEETGQKKI  96
             E +TG+K I
Sbjct  256  AERDTGKKNI  285



Lambda      K        H        a         alpha
   0.319    0.136    0.414    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1430252580


Query= TILAPIA DO NILO

Length=93
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

Tri_24805|m.699945  Tri_24805|g.699945 ORF Tri_24805|g.699945 Tri...  41.6    2e-05


>Tri_24805|m.699945 Tri_24805|g.699945  ORF Tri_24805|g.699945 Tri_24805|m.699945 
type:complete len:102 (+) Tri_24805:22-327(+)
Length=306

 Score = 41.6 bits (96),  Expect = 2e-05, Method: Compositional matrix adjust.
 Identities = 23/73 (32%), Positives = 36/73 (49%), Gaps = 10/73 (14%)
 Frame = +1

Query  23   QWSYGLSPGGKRDL-DNFSDTLGNMVEEFPRVEA---PCSVFGCAEESPFAKMYRVKGLL  78
             WSYGL PGGKR+  ++  D L ++ E+   + A   P  V  C  +S   ++  +    
Sbjct  85   HWSYGLRPGGKRNAHESLQDVLQDITEDMELLHAPREPACVHPCVRKSSLREILNI----  252

Query  79   ASLAERENGHRTF  91
              LAER+ G +  
Sbjct  253  --LAERDTGKKNI  285



Lambda      K        H        a         alpha
   0.320    0.137    0.440    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1446142839


Query= SALMAO DO ARTICO

Length=70


***** No hits found *****



Lambda      K        H        a         alpha
   0.313    0.129    0.393    0.792     4.96 

Gapped
Lambda      K        H        a         alpha    sigma
   0.267   0.0410    0.140     1.90     42.6     43.6 

Effective search space used: 1401876812


  Database: transcriptome.fasta
    Posted date:  Apr 26, 2018  10:53 AM
  Number of letters in database: 171,729,825
  Number of sequences in database:  170,863



Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Neighboring words threshold: 13
Window for multiple hits: 40