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R

R - Class in peridot.CLI.Commands
Command to manage R environments.
R(String[]) - Constructor for class peridot.CLI.Commands.R
 
readFile(File) - Static method in class peridot.Archiver.Manager
Build a String from the contents of a file
readLines() - Method in class peridot.script.r.RInfoParser
 
readPackages(List<String>) - Method in class peridot.script.r.RInfoParser
 
readPackagesAvailable() - Method in class peridot.script.r.Interpreter
 
readPackagesFromOutput(Output) - Method in class peridot.script.r.Interpreter
 
readPackagesScript - Static variable in class peridot.Archiver.Places
 
readVersion(List<String>) - Method in class peridot.script.r.RInfoParser
 
ready - Variable in class peridot.script.ScriptRunnable
 
reloadFlag - Variable in class peridot.Archiver.Spreadsheet
 
reloadRows(int) - Method in class peridot.Archiver.Spreadsheet
 
remainingAnalysisScripts - Variable in class peridot.script.Task
 
removeInterpreter() - Static method in class peridot.CLI.PeridotCmd
 
removeInterpreter(int) - Static method in class peridot.script.r.Interpreter
 
removeScriptResults() - Static method in class peridot.script.RModule
 
reportInvalidOutput() - Method in class peridot.script.r.PackageInstaller
 
requiredExternalFiles - Variable in class peridot.script.RModule
 
requiredPackages - Variable in class peridot.script.RModule
 
requiredPackages() - Static method in class peridot.script.RModule
 
requiredPackagesInstalled() - Method in class peridot.script.RModule
 
requiredPackagesInstalled(Interpreter) - Method in class peridot.script.RModule
 
requiredPackagesNotInstalled() - Method in class peridot.script.RModule
 
requiredPackagesNotInstalled(Interpreter) - Method in class peridot.script.RModule
 
requiredParameters - Variable in class peridot.AnalysisParameters
Maps parameter name to type of parameter to be passed.
requiredParameters - Variable in class peridot.script.RModule
 
requiredScripts - Variable in class peridot.script.RModule
 
requirementsSufficed() - Method in class peridot.script.RModule
 
resetAllModules() - Static method in class peridot.Operations
 
results - Variable in class peridot.script.RModule
 
resultsFolder - Variable in class peridot.script.RModule
 
RInfoParser - Class in peridot.script.r
Created by pentalpha on 26/01/2018.
RInfoParser(Output) - Constructor for class peridot.script.r.RInfoParser
 
RModule - Class in peridot.script
 
RModule(String, String, Map<String, Class>, Set<String>, Set<String>, Set<String>) - Constructor for class peridot.script.RModule
 
RModule(File) - Constructor for class peridot.script.RModule
 
roundFloat(float, Global.RoundingMode) - Static method in class peridot.Global
 
roundingMode - Variable in class peridot.CLI.AnalysisFileParser
 
RoundingMode() - Constructor for enum peridot.Global.RoundingMode
 
roundingModeStr - Static variable in class peridot.CLI.AnalysisFileParser
 
roundMode - Variable in class peridot.AnalysisData
 
roundValuesAndEraseNotUse(String[], String[]) - Method in class peridot.AnalysisData
 
rowIsNames(String[]) - Static method in class peridot.Archiver.Spreadsheet
 
rows - Variable in class peridot.Archiver.Spreadsheet
 
run() - Method in class peridot.CLI.Command
 
run() - Method in class peridot.CLI.Commands.IN
 
run() - Method in class peridot.CLI.Commands.LS
 
run() - Method in class peridot.CLI.Commands.OUT
 
run() - Method in class peridot.CLI.Commands.R
 
RUN - Class in peridot.CLI.Commands
Command to create a example Analysis File or run an Analysis File to make an analysis.
RUN(String[]) - Constructor for class peridot.CLI.Commands.RUN
 
run() - Method in class peridot.CLI.Commands.RUN
 
run(Interpreter, boolean) - Method in class peridot.script.r.Script
 
run() - Method in class peridot.script.ScriptRunnable
 
runnable - Variable in class peridot.script.ScriptExec
 
running - Variable in class peridot.script.r.InstallationBatch
 
running - Variable in class peridot.script.r.PackageInstaller
 
running - Variable in class peridot.script.r.Script
 
running - Variable in class peridot.script.ScriptExec
 
runningScripts - Variable in class peridot.script.Task
 
runningUpdater - Variable in class peridot.script.ScriptExec
 
runtime - Variable in class peridot.script.ScriptRunnable
 
rVersion - Variable in class peridot.script.r.Interpreter
 
rVersion - Variable in class peridot.script.r.RInfoParser
 
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