- pack - Variable in class peridot.script.r.PackageInstaller
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- Package - Class in peridot.script.r
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- Package(String, String) - Constructor for class peridot.script.r.Package
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- PackageInstaller - Class in peridot.script.r
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R package installer for R environments
Created by pentalpha on 19/02/2018.
- PackageInstaller(Interpreter, Package) - Constructor for class peridot.script.r.PackageInstaller
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- PackageInstaller.Status - Enum in peridot.script.r
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- packages - Variable in class peridot.script.r.RInfoParser
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- packagesFinishedFlag - Variable in class peridot.script.Task
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- packagesRepository - Variable in class peridot.Archiver.PeridotConfig
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- packagesToInstallString() - Method in class peridot.script.r.Interpreter
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- paramEqualStr - Static variable in class peridot.CLI.AnalysisFileParser
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- parameters - Variable in class peridot.AnalysisParameters
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The parameters that have already been passed.
- parameters - Variable in class peridot.script.RModule
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- parametersSufficed() - Method in class peridot.script.RModule
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- paramModSeparator - Static variable in class peridot.CLI.AnalysisFileParser
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- params - Variable in class peridot.CLI.AnalysisFile
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- params - Variable in class peridot.CLI.AnalysisFileParser
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- params - Variable in class peridot.script.Task
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- paramsStartStr - Static variable in class peridot.CLI.AnalysisFileParser
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- paramTypes - Variable in class peridot.CLI.AnalysisFileParser
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- parse(File) - Method in class peridot.CLI.AnalysisFileParser
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- ParseException(String) - Constructor for exception peridot.CLI.AnalysisFileParser.ParseException
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- parseOutput(Output) - Method in class peridot.script.r.PackageInstaller
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- parseParams(Set<String>) - Method in class peridot.CLI.AnalysisFileParser
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- parseParamsAndModules(String, Set<String>) - Method in class peridot.CLI.AnalysisFileParser
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- parseSingleLineInfo(String, String) - Method in class peridot.CLI.AnalysisFileParser
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- passParameter(String, Object) - Method in class peridot.AnalysisParameters
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Pass a parameter.
- passParameter(String, Object) - Method in class peridot.script.RModule
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- passParameters(AnalysisParameters) - Method in class peridot.script.RModule
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- peridot - package peridot
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- peridot.Archiver - package peridot.Archiver
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- peridot.CLI - package peridot.CLI
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- peridot.CLI.Commands - package peridot.CLI.Commands
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- peridot.script - package peridot.script
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- peridot.script.r - package peridot.script.r
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- PeridotCmd - Class in peridot.CLI
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- PeridotCmd() - Constructor for class peridot.CLI.PeridotCmd
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- PeridotConfig - Class in peridot.Archiver
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Changing, saving and loading configurations like preferred R environment and packages repository
- PeridotConfig() - Constructor for class peridot.Archiver.PeridotConfig
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- peridotConfigFile - Static variable in class peridot.Archiver.Places
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- peridotDir - Static variable in class peridot.Archiver.Places
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The master directory where all the user stuff is stored.
- Persistence - Class in peridot.Archiver
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Utilities to import and export Objects
- Persistence() - Constructor for class peridot.Archiver.Persistence
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- Places - Class in peridot.Archiver
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Archiver.Places holds file and directories paths.
- Places() - Constructor for class peridot.Archiver.Places
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- playReady() - Method in class peridot.script.Task
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- PostAnalysisModule - Class in peridot.script
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- PostAnalysisModule(String, String, Map<String, Class>, Set<String>, Set<String>, Set<String>) - Constructor for class peridot.script.PostAnalysisModule
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- PostAnalysisModule(File) - Constructor for class peridot.script.PostAnalysisModule
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- PostAnalysisOntology - Class in peridot.script
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- PostAnalysisOntology(String, String) - Constructor for class peridot.script.PostAnalysisOntology
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- PostAnalysisOntology(File) - Constructor for class peridot.script.PostAnalysisOntology
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- preFailed - Variable in class peridot.script.ScriptRunnable
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- preFailed(String) - Method in class peridot.script.Task
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- preferredRVersion - Static variable in class peridot.Archiver.PeridotConfig
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- printArray(int[]) - Static method in class peridot.Global
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Prints an array of integers.
- printArray(String[]) - Static method in class peridot.Global
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Prints an array of Strings.
- printDetails() - Method in class peridot.CLI.Command
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- printInConsole - Variable in class peridot.Output
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- printInvalidCommand(String) - Static method in class peridot.CLI.UserInterface
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- printMajorHelp() - Static method in class peridot.CLI.UserInterface
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- printNoCommand() - Static method in class peridot.CLI.UserInterface
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- printRoundingTable() - Static method in class peridot.Global
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- process - Variable in class peridot.script.r.Script
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- process - Variable in class peridot.script.ScriptExec
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- process - Variable in class peridot.script.ScriptRunnable
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- processBuilder - Variable in class peridot.script.r.Script
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- processBuilder - Variable in class peridot.script.ScriptRunnable
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- processingStatus - Variable in class peridot.script.Task
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