Package: r-peridot-gui
Version: 1.1-1
Section: base
Priority: optional
Architecture: all
Depends: openjdk-8-jre (>= 8u181), wget (>= 1.19.4), ca-certificates (>= 20180409), r-base (>= 3.4.1), build-essential (>= 12.4), make (>= 4.1), gcc (>= 4:7.3.0), g++ (>= 4:7.3.0), gfortran (>= 4:7.3.0), libxml2-dev (>= 2.9.4+dfsg1), libcurl4-openssl-dev (>= 7.58.0), libssl-dev(>= 1.1.0g), libcairo2 (>= 1.15.10), libcairo2-dev (>= 1.15.10), libpango1.0-0 (>= 1.40.14), libpango1.0-dev (>= 1.40.14)
Maintainer: Pitágoras Alves <alves.pitagoras@gmail.com>
Description: Hello World
 Software for intuitively doing Differential Gene Expression (DGE) analysis, based on R packages.
 R-Peridot uses several Bioconductor packages for DGE analysis: DESeq, DESeq2, EBSeq, edgeR and sSeq. Each of these is use its own methodologies to find Differentially Expressed Genes (DEGs) among the ones in the input.
 The results of these is used to create differential expression consensus, with the intersection of all sets of DEGs. After that our software generates several graphs including Heat Maps, Dendrogram, PCA, Cluster Profiler and KEGG charts.