Transcript_114

cmscan-Rfam

Family :

sR2

Id:

RF01139

Type:

Gene; snRNA; snoRNA; CD-box;

Taxonomy:

Archaea;

Ontology:

GO:0006396 RNA processingRF01139

Description:

not description

Score:

18.2

E-value:

0.0055

From sequence:

483

To sequence:

530

Alignments:

                     :::::::::::.....:::::::::::::::::::::::::::::::: CS
         RF01139   3 ggGUGAUGAAa.....GgAGaAguAUCUGAucuGUGAuGAAGugGAUG 45 
                     ++GUGAUGA a     Gg+G A  A+CUGA +  UGA+GAAGu+GA+G
  Transcript_114 483 AUGUGAUGACAaacuuGGGGGAAAAGCUGACUGAUGAAGAAGUUGACG 530
                     6799****9864444468899999*********************975 PP

RNAfold
>Transcript_114
CGUCAUGUGAUGACAAACUUGGGGGAAAAGCUGACUGAUGAAGAAGUUGA
CGAAAUG
.(((((...)))))...............(..((((........))))..)...... ( -6.60)

Length sequence

: 57

Length match:

46