Transcript_117

cmscan-Rfam

Family :

mir-305

Id:

RF00732

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00732

Description:

not description

Score:

36.9

E-value:

5.3e-07

From sequence:

2

To sequence:

88

Alignments:

                                                       v                  v                                    NC
                    :<<<<<<<<<<<----<<<.<<<<<<<<<<<<<<-<-<<____________>>->>>>>>>>>>>>>>>.>>>---->>>>>->>>>>>: CS
         RF00732  1 ucugcccCAugucuAUuGu.aCUuCAcCAgGuGCUCUGGUguuuuUugaaaCCcGGCaCcUGgUGaAGu.aCacUuaauaUGagggcagu 88
                     :::::CCA:::  A UGU ACU:CA:CA: UGCU   :U +     G+ A:   GCA :UG:UG:AGU ACA U+ :::UG G::::: 
  Transcript_117  2 GGAAAACCACACGGACUGUcACUGCAACACCUGCUACUAUCACA--AGUCAUAAGGCAGGUGUUGCAGUgACAGUCCGUGUG-GUUUUCC 88
                    ******************758*************9554544433..334556678*************857***********.******* PP

RNAfold
>Transcript_117
GGAAAACCACACGGACUGUCACUGCAACACCUGCUACUAUCACAAGUCAU
AAGGCAGGUGUUGCAGUGACAGUCCGUGUGGUUUUCCA
((((((((((((((((((((((((((((((((((((((......))).....))))))))))))))))))))))))))))))))))). (-72.10)

Length sequence

: 88

Length match:

85