Transcript_123

cmscan-Rfam

Family :

TtnuCD7

Id:

RF02284

Type:

Gene; snRNA; snoRNA; CD-box;

Taxonomy:

Eukaryota;

Ontology:

GO:0006396 RNA processingRF02284

Description:

not description

Score:

18.3

E-value:

0.0036

From sequence:

19

To sequence:

105

Alignments:

                     :::::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::::::::: CS
         RF02284   3 CAUGAUGAUAUAAAUAUGGAAUUACCGUCUGAAuUUAgAUUGAUGgA.AAAuUUUUGCuAAACUGAUAGAAUAUUcAAACAUUUCUC 88 
                     CAU A G UA AAAUAU   AUU  C U U  AuU A A UGAUG A AAA UUUUGC+ AA   A A AA A U+AAACA UU  C
  Transcript_123  19 CAUAACGGUAGAAAUAUUUUAUUUUCUUUUACAUUAAAACUGAUGUAcAAACUUUUGCAGAAUAUAAAUAAGACUAAAACACUUUCC 105
                     678888999*************************99*********9846677999********99****************988655 PP

RNAfold
>Transcript_123
UUUUUGCAGACAUAACGGUAGAAAUAUUUUAUUUUCUUUUACAUUAAAAC
UGAUGUACAAACUUUUGCAGAAUAUAAAUAAGACUAAAACACUUUCCGUA
CCUGUAGG
.(((((((((.........(((((........)))))..(((((((....)))))))......))))))))).................................... (-13.90)

Length sequence

: 108

Length match:

85