Transcript_135

cmscan-Rfam

Family :

mir-616

Id:

RF00995

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00995

Description:

not description

Score:

29.8

E-value:

0.0012

From sequence:

2

To sequence:

93

Alignments:

                                     v     v v   v   v   v               v   v   v   v v    v                         NC
                    ::<<<<<<<<<<<<--<<<<<-<<<<<<<<<<<<<<<<<_____________>>>>>>>>>>>>>>>>>>>>>>-->>>>>>>>>>>>::::::::: CS
         RF00995  1 uuagGucauuccuCcaCuCaaAacCCucCaguGgcuucCcUGAcAUGAaAUAGgaagcCacuGgaGGguuuGaGCAGaggaaugaCcuGuUUuAaaa 97
                      :G:U:A:U:C:: +C :::AA : U:: :U: :UU : UGACA       : AA: :A: ::A : U::: G A::G:A:U:A:C:GU       
  Transcript_135  2 ACCGAUGACUUCCUUUCUUUCAACUCUGUCUUUAUUUCUUUGACAGA-----ACAAAGAAAAACAAAUUGAAUGAAAGGAAGUCAUCGGUGGGGGGG 93
                    ****************************************9977755.....55555556679********************************** PP

RNAfold
>Transcript_135
ACCGAUGACUUCCUUUCUUUCAACUCUGUCUUUAUUUCUUUGACAGAACA
AAGAAAAACAAAUUGAAUGAAAGGAAGUCAUCGGUGGGGGGGAGGG
(((((((((((((((((.(((((...(((.....((((((((......)))))))).)))..))))).)))))))))))))))))........... (-39.60)

Length sequence

: 96

Length match:

91