Transcript_197

cmscan-Rfam

Family :

MIR477

Id:

RF00780

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00780

Description:

not description

Score:

47.3

E-value:

2.5e-10

From sequence:

2

To sequence:

92

Alignments:

                                                                                                            NC
                    ::<<<<-<<<<<<<<<<<<-<<<<<<<<<<<<<________________~~~~~~>>>>>>>>>>>>>->>>>>>>>>>>>->>>>: CS
         RF00780  1 GAaGgcUcCAaucuCcCuCAgAGGCuuCCAacaUuuCAGauUAaauAau*[18]*uguUGGaaGCCUcuGaGgGagauUGgAgcCuU 99
                      :GG: CC:::::CC::CAGAGGCUUC::A::     G+UUA+ + +       ::U::GAAGCCUCUG::GG:::::GG :CC: 
  Transcript_197  2 CUCGGACCCCUGGCCCUCCAGAGGCUUCUGAUC-----GUUUAUCCCUG*[15]*GAUCAGAAGCCUCUGGAGGGCCAGGGGUCCGA 92
                    *********************************.....55555444444...5..******************************** PP

RNAfold
>Transcript_197
CUCGGACCCCUGGCCCUCCAGAGGCUUCUGAUCGUUUAUCCCUGGACCCA
GAGAUACACGAUCAGAAGCCUCUGGAGGGCCAGGGGUCCGAGCUCAU
(((((((((((((((((((((((((((((((((((.((((.(((....))).)))).)))))))))))))))))))))))))))))))))))..... (-90.20)

Length sequence

: 97

Length match:

90