Transcript_215

cmscan-Rfam

Family :

mir-290

Id:

RF00665

Type:

Gene; miRNA;

Taxonomy:

Eukaryota;

Ontology:

GO:0035068 micro-ribonucleoprotein complexRF00665

Description:

not description

Score:

33.1

E-value:

5.4e-06

From sequence:

34

To sequence:

100

Alignments:

                                                   v          v                               NC
                     :<<<<<-<<<<<<<<<<<<-<<-<-<<<-<<____~~~~~~>>->>>->->>->>>>>>>>>>>>->>>>>: CS
         RF00665   1 uCaccCuGuGgcaCuCAAAUguGGggGCaCUuUuc*[16]*AGUGCcgCcacaUUUGaGugcCaCCGgguGa 82 
                     +:::C: G:::CACUC   U:UGG+GGC C U UC       G GCC+CCA:A   GAGUG:::C+:G:::+
  Transcript_215  34 CUGACUAGCUACACUC---UAUGGAGGCGCUUCUC*[ 7]*UGAGCCUCCAUA---GAGUGUAGCUAGUCAG 100
                     ****************...799******9853333...4..688******998...**************** PP

RNAfold
>Transcript_215
UAUUUAGCUGACUAGCUACACUCUAUGGAGGCGCUUCUCAUUUGAUUGAG
CCUCCAUAGAGUGUAGCUAGUCAGCUAAAUAC
((((((((((((((((((((((((((((((((...((......))....)))))))))))))))))))))))))))))))). (-61.60)

Length sequence

: 82

Length match:

65